[gin-ops] start Savannah run

Thu Nov 30 19:05:10 CST 2006

Thanks JP,

But I am running into some problems.  I've tried both from our server and
rocks-52 and this is what I get:
[cme at rocks-52 ~]$ globus-job-run tg-grid1.uc.teragrid.org/jobmanager-fork
/bin/uname -a
GRAM Job submission failed because the connection to the server failed
(check host and port) (error code 12)
[cme at rocks-52 ~]$ grid-proxy-info
subject  : /C=AU/O=APACGrid/OU=Monash University/CN=Colin
Enticott/CN=1087048434
issuer   : /C=AU/O=APACGrid/OU=Monash University/CN=Colin Enticott
identity : /C=AU/O=APACGrid/OU=Monash University/CN=Colin Enticott
type     : Proxy draft (pre-RFC) compliant impersonation proxy
strength : 512 bits
path     : /home/cme/globus_proxy.APACGrid
timeleft : 836:30:26  (34.8 days)
[cme at rocks-52 ~]$ ssh tg-grid1.uc.teragrid.org
Warning: Permanently added 'tg-grid1.uc.teragrid.org' (RSA) to the list of
known hosts.
Permission denied (external-keyx,gssapi,publickey,gssapi,hostbased).
[cme at rocks-52 ~]$

That is the certificate that I registered with.  I also tried the ssh key
pair I put up on the pragma wiki.

Any thoughts?

Thanks,
Colin

---
Colin Enticott, Research Scientist, Ph: +61 03 9903 2215
Room H7.26, Level 7, Building H, Monash University Caulfield 3145, Australia

> -----Original Message-----
> From: JP Navarro [mailto:navarro at mcs.anl.gov]
> Sent: Friday, 1 December 2006 2:47 AM
> To: Colin Enticott
> Cc: zhengc at sdsc.edu; 'Terrence Martin'; gin-ops at ggf.org; 'Oscar Koeroo';
> gin-auth at ggf.org
> Subject: Re: start Savannah run
> 
> Colin,
> 
> You should be set to go on the UC/ANL TeraGrid cluster.
> 
> GT4 Pre-WS GRAM: tg-grid1.uc.teragrid.org:2119
> GT4 WS GRAM:     tg-grid1.uc.teragrid.org:8443 (FORK, PBS)
> GT4 GridFTP:     tg-gridftp.uc.teragrid.org:2811
> 
> Regards,
> 
> JP
> 
> On Nov 30, 2006, at 2:43 AM, Colin Enticott wrote:
> 
> > Thankyou everyone.
> >
> > I am now registered on the GIN VO (well, I appear here:
> > http://kuiken.nikhef.nl/gin.ggf.org/grid-mapfile).
> >
> > What is my next step?
> >
> > Thanks,
> > Colin
> >
> > ---
> > Colin Enticott, Research Scientist, Ph: +61 03 9903 2215
> > Room H7.26, Level 7, Building H, Monash University Caulfield 3145,
> > Australia
> >
> >
> >> -----Original Message-----
> >> From: Cindy Zheng [mailto:zhengc at sdsc.edu]
> >> Sent: Thursday, 30 November 2006 11:59 AM
> >> To: 'Terrence Martin'
> >> Cc: 'JP Navarro'; gin-ops at ggf.org; 'Oscar Koeroo'; 'Colin
> >> Enticott'; gin-
> >> auth at ggf.org
> >> Subject: RE: FW: start Savannah run
> >>
> >> Thank you, Terrence!
> >> We'll wait to hear from Colin when Colin finishes
> >> registering to gin vo.
> >> Cindy
> >>
> >>> -----Original Message-----
> >>> From: Terrence Martin [mailto:tmartin at physics.ucsd.edu]
> >>> Sent: Wednesday, November 29, 2006 11:36 AM
> >>> To: Oscar Koeroo
> >>> Cc: zhengc at sdsc.edu; 'JP Navarro'; gin-ops at ggf.org; 'Colin
> >>> Enticott'; gin-auth at ggf.org
> >>> Subject: Re: FW: start Savannah run
> >>>
> >>>
> >>> Oscar Koeroo wrote:
> >>>> Hi Terrence and Cindy,
> >>>>
> >>>> Getting new users up for registration on the GIN VO is easy. To be
> >>>> able to access the secured website and for authentication reasons
> >>>> during the registration process new users must have their
> >>> certificate
> >>>> loaded and ready in their webbrowser. The VOMS server is
> >>> loaded with
> >>>> all IGTF accredited CAs including the Fermilab kCA.
> >>>>
> >>>> Go to the website:
> >>> https://kuiken.nikhef.nl:8443/voms/gin.ggf.org/ and
> >>>> apply for a "New user registration".
> >>>>
> >>>>
> >>>> The usual VOMS configuration info is also available. I
> >>> don't know what
> >>>> you'll need to populate a GUMS server. This VOMS server is as any
> >>>> other so I guess you can use your regular setup.
> >>>> In addition to the secured interface I've also made available a
> >>>> non-secured way of grabbing a grid-mapfile.
> >>>> http://kuiken.nikhef.nl/gin.ggf.org/grid-mapfile
> >>>> There is also an RSS-feed pointing to the grid-mapfile and
> >>> the secured
> >>>> interface at
> >>> http://kuiken.nikhef.nl/gin.ggf.org/feed-gin.ggf.org.xml
> >>>>
> >>>> Unfortunately I'm not aware of a clear guide. I do know a guide for
> >>>> creating the packed certificate files that go into your
> >>> browser if you
> >>>> start from a two PEM formated files (certificate file + private key
> >>>> file) that's at http://certificate.nikhef.nl/info/browser
> >>>> Once a user has passed that stage, the registration for the
> >>> VO is as
> >>>> trivial as any web-forum account registration.
> >>>>
> >>>
> >>> I am assuming this user already has a grid cert since they
> >>> list a DN so
> >>> only VOMS registration is required. Once that is done either I
> >>> run my
> >>> update of GUMS manually or in 720/2 minutes on average the
> >>> user will be
> >>> automatically downloaded into my GUMS database. I actually do
> >>> not have
> >>> to do anything, but I can speed things up ever so slightly if I
> >>> am in
> >>> the office and someone asks me to try refreshing gums.
> >>>
> >>> Terrence
> >>>
> >>>
> >>>>
> >>>>
> >>>>    Oscar
> >>>>
> >>>>
> >>>>
> >>>> Cindy Zheng wrote:
> >>>>> Sounds right, Terrence. Let me ask Oscar who has helped me
> >>> with GIN
> >>>>> VO before.
> >>>>>
> >>>>> Hi, Oscar,
> >>>>> Could you advise Colin what need to be done to be
> >>>>> added in GIN VO?
> >>>>> I'm also cc'ing to gin-auth list.
> >>>>> If there is a guide for potential GIN users, please
> >>>>> let me know the url and I can link it to our GINOPS
> >>>>> page.
> >>>>>
> >>>>> Thanks,
> >>>>>
> >>>>> Cindy
> >>>>>
> >>>>>
> >>>>>> -----Original Message-----
> >>>>>> From: Terrence Martin [mailto:tmartin at physics.ucsd.edu] Sent:
> >>>>>> Tuesday, November 28, 2006 3:24 PM
> >>>>>> To: zhengc at sdsc.edu
> >>>>>> Cc: 'JP Navarro'; gin-ops at ggf.org; 'Colin Enticott'
> >>>>>> Subject: Re: FW: start Savannah run
> >>>>>>
> >>>>>>
> >>>>>> The quickest and easiest way for me is to have him added to a VO.
> >>>>>> How easy is it to add him to the GIN VO? One in there I
> >>> can hit my
> >>>>>> gums reload and he will be able to access UCSD as a GIN user. Any
> >>>>>> other approach requires me hacking his DN into my local
> >>> VO which I
> >>>>>> prefer to avoid and does not help him with any other site.
> >>>>>>
> >>>>>> Terrence
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Cindy Zheng wrote:
> >>>>>>
> >>>>>>> Thanks, Terrence, for the quick reply!
> >>>>>>> Colin has not been a GIN user.
> >>>>>>> What do you think it's the best way to get colin access?
> >>>>>>> Cindy
> >>>>>>>
> >>>>>>>
> >>>>>>>> -----Original Message-----
> >>>>>>>> From: Terrence Martin [mailto:tmartin at physics.ucsd.edu] Sent:
> >>>>>>>> Tuesday, November 28, 2006 2:53 PM
> >>>>>>>> To: zhengc at sdsc.edu
> >>>>>>>> Cc: 'JP Navarro'; gin-ops at ggf.org
> >>>>>>>> Subject: Re: FW: start Savannah run
> >>>>>>>>
> >>>>>>>>
> >>>>>>>> We only have a production cluster, but I should still
> >>> be
> >>>>>> able to help.
> >>>>>>
> >>>>>>>> I do not seem to have Colin in my GUMS database though
> >>> for
> >>>>>> GIN or any
> >>>>>>>> other VO. Should he be downloaded with GIN's users?
> >>>>>>>>
> >>>>>>>> Terrence
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>
> >>>>>>>> Cindy Zheng wrote:
> >>>>>>>>
> >>>>>>>>> Hi, JP and Terrence,
> >>>>>>>>>
> >>>>>>>>> Could you help Colin to get ready to run Savannah
> >>>>>>>>> application on your GIN testbed clusters?
> >>>>>>>>> You can find Colin's user info at
> >>>>>>>>> http://wiki.pragma-grid.net/index.php?title=ColinDetails
> >>>>>>>>> If you need more info or action from Colin, or have
> >>> any questions
> >>>>>>>>> for Colin or me, please let us know.
> >>>>>>>>>
> >>>>>>>>> Thank you very much!
> >>>>>>>>>
> >>>>>>>>> Cindy
> >>>>>>>>>
> >>>>>>>>> -----Original Message-----
> >>>>>>>>> From: Cindy Zheng [mailto:zhengc at sdsc.edu] Sent: Tuesday,
> >>>>>>>>> November 28, 2006 2:31 PM
> >>>>>>>>> To: 'gin-ops at ggf.org'
> >>>>>>>>> Subject: start Savannah run
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>> Dear all,
> >>>>>>>>>
> >>>>>>>>> Thanks for all the people involved to help make
> >>>>>>>>> TDDFT application run and GIN testbed monitoring
> >>>>>>>>> very fruitful experiments! We have learned a lot and have
> >>>>>>>>> presented our learnings at OGF and SC06.
> >>>>>>>>>
> >>>>>>>>> Let's continue our collaborative effort with our plan
> >>> - start our
> >>>>>>>>> next experiment with Savannah
> >>>>>>>>> fire simulation - a data-intensive application, to
> >>> explore data
> >>>>>>>>> related interoperation issues.
> >>>>>>>>>
> >>>>>>>>> Colin Enticott at Monash University of Australia
> >>>>>>>>> is the lead driver. Colin has documented the
> >>>>>>>>> introduction and requirements of this application at
> >>>>>>>>> http://wiki.pragma-grid.net/index.php?title=Savannah
> >>>>>>>>> or go to
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>> http://forge.gridforum.org/sf/wiki/do/viewPage/projects.gin/wi
> >>>>>>>>
> >>>>>>> ki/GinOps
> >>>>>>>
> >>>>>>>> click "Savannah" under "Applications",
> >>>>>>>> where "first Savannah experiment" is refering to
> >>>>>>>> a previous experiment in PRAGMA testbed. The
> >>>>>>>> "second Savannah experiment" is the one for GIN testbed.
> >>>>>>>>
> >>>>>>>> We like to run this application on all Grids in GIN
> >>> testbed, but
> >>>>>>>> in 2 steps. First, we will run it on
> >>> PRAGMA/TeraGrid/OSG - since
> >>>>>>>> these should be relatively easier to do. We like to get
> >>> this done
> >>>>>>>> before the year end.
> >>>>>>>> The next step, Colin will work with EGEE and Nordugrid
> >>>>>>>> to develop possible solutions, to enable interoperation
> >>>>>>>> and to include all 5 Grids in the run.
> >>>>>>>>
> >>>>>>>> Thanks in advance for your continued help with this!
> >>>>>>>>
> >>>>>>>> Cindy
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>
> >>>>>>>
> >>>>
> >>>
> >